Transcript: ENSDART00000125674.3 pcdh2ab9-201

Description

protocadherin 2 alpha b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-8]

Location

About this transcript

This transcript has 4 exons, is annotated with 67 domains and features, is associated with 1097 variant alleles and maps to 444 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000160123.2	pcdh2ab9-202	7916	1006aa	ENSDARP00000130311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180729.1	pcdh2ab9-203	8101	938aa	ENSDARP00000144849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000181557.1	pcdh2ab9-204	7718	940aa	ENSDARP00000157232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000191149.1	pcdh2ab9-206	7715	939aa	ENSDARP00000157168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000183928.1	pcdh2ab9-205	7715	939aa	ENSDARP00000154289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000125674.3	pcdh2ab9-201	7397	940aa	ENSDARP00000109486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 7,397 bps, Translation length: 940 residues

Version

ENSDART00000125674.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.