Transcript: ENSDART00000125555.2 NUP205-201

Description

nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]

Location

About this transcript

This transcript has 40 exons, is annotated with 10 domains and features, is associated with 1332 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125555.2	NUP205-201	6006	2001aa	ENSDARP00000107575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143923.3	NUP205-202	6109	1977aa	ENSDARP00000113552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000062216.7	NUP205-203	6108	1970aa	ENSDARP00000062215.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJ18	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000062360.7	NUP205-204	6006	1996aa	ENSDARP00000062359.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 40, Coding exons: 40, Transcript length: 6,006 bps, Translation length: 2,001 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000125555.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.