Transcript: ENSDART00000125413.4 xrn1-201

Description

5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]

Gene Synonyms

wu:fk92c07, zgc:63635

Location

About this transcript

This transcript has 42 exons, is annotated with 36 domains and features, is associated with 878 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125413.4	xrn1-201	6418	1697aa	ENSDARP00000105487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160641.2	xrn1-202	1694	483aa	ENSDARP00000141389.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYZ5	-

Summary

Statistics

Exons: 42, Coding exons: 42, Transcript length: 6,418 bps, Translation length: 1,697 residues

Version

ENSDART00000125413.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.