Transcript: ENSDART00000125188.4 SRSF9-203

Description

serine and arginine rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 431 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002985.7	SRSF9-201	1423	245aa	ENSDARP00000002874.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125188.4	SRSF9-203	1243	245aa	ENSDARP00000110534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVC6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135144.2	SRSF9-202	1062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,243 bps, Translation length: 245 residues

Version

ENSDART00000125188.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.