Transcript: ENSDART00000125139.3 acin1a-201

Description

apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]

Location

Chromosome 2: 38,216,345-38,225,373 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 280 variant alleles and maps to 213 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054290.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000136082.3	acin1a-204	2378	572aa	ENSDARP00000117109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146485.4	acin1a-208	4158	1376aa	ENSDARP00000121592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000128043.4	acin1a-202	3315	857aa	ENSDARP00000104900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144518.3	acin1a-207	2523	548aa	ENSDARP00000113879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000137395.2	acin1a-205	806	149aa	ENSDARP00000121743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142342.3	acin1a-206	779	260aa	ENSDARP00000114736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000131901.2	acin1a-203	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000125139.3	acin1a-201	803	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 803 bps,

Version

ENSDART00000125139.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000125139.3 acin1a-201

Summary

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Transcript: ENSDART00000125139.3 acin1a-201

Summary

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