Transcript: ENSDART00000125071.3 si:ch1073-410j4.2-201

Description

si:ch1073-410j4.2 [Source:ZFIN;Acc:ZDB-GENE-091204-1]

Location

About this transcript

This transcript has 3 exons, is associated with 130 variant alleles and maps to 556 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000158504.2	si:ch1073-410j4.2-202	3823	1126aa	ENSDARP00000131942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000182521.1	si:ch1073-410j4.2-203	3063	1020aa	ENSDARP00000154424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125071.3	si:ch1073-410j4.2-201	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 690 bps,

Version

ENSDART00000125071.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.