Transcript: ENSDART00000124997.3 card19-201

Description

caspase recruitment domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-041008-5]

Gene Synonyms

im:6898834, si:ch211-243c14.4

Location

Chromosome 11: 37,095,165-37,101,987 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 395 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000091304.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124997.3	card19-201	2461	179aa	ENSDARP00000107905.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000181503.1	card19-203	540	179aa	ENSDARP00000146969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RK19	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000157335.2	card19-202	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,461 bps, Translation length: 179 residues

Version

ENSDART00000124997.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000124997.3 card19-201

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Transcript: ENSDART00000124997.3 card19-201

Summary

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