Transcript: ENSDART00000124917.4 mpl-202

Description

MPL proto-oncogene, thrombopoietin receptor [Source:ZFIN;Acc:ZDB-GENE-060421-1]

Location

Chromosome 6: 33,949,280-33,978,760 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 941 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039222.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000124917.4	mpl-202	2175	614aa	ENSDARP00000109739.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000057297.6	mpl-201	1968	655aa	ENSDARP00000057296.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151725.2	mpl-203	1840	613aa	ENSDARP00000126229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,175 bps, Translation length: 614 residues

Version

ENSDART00000124917.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000124917.4 mpl-202

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Transcript: ENSDART00000124917.4 mpl-202

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