Transcript: ENSDART00000124850.3 irf10-202

Description

interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]

Location

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 246 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000030643.8	irf10-201	1738	392aa	ENSDARP00000031619.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186995.1	irf10-203	1223	392aa	ENSDARP00000146817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5I1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124850.3	irf10-202	784	147aa	ENSDARP00000107166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 784 bps, Translation length: 147 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000124850.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.