Transcript: ENSDART00000124798.4 CFAP45-201

Description

cilia and flagella associated protein 45 [Source:ZFIN;Acc:ZDB-GENE-070209-143]

Location

About this transcript

This transcript has 7 exons, is associated with 8 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000192545.1	CFAP45-204	3668	543aa	ENSDARP00000148801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000098292.5	CFAP45-205	1862	497aa	ENSDARP00000089064.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000127379.3	CFAP45-202	1220	345aa	ENSDARP00000112386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000124444.3	CFAP45-203	824	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000124798.4	CFAP45-201	1293	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,293 bps,

Version

ENSDART00000124798.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.