Transcript: ENSDART00000124691.4 smpd5-202

Description

sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]

Location

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 1003 variant alleles and maps to 99 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083558.6	smpd5-201	2177	545aa	ENSDARP00000077993.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124691.4	smpd5-202	2245	545aa	ENSDARP00000104571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG30	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,245 bps, Translation length: 545 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1QG30

Version

ENSDART00000124691.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.