Transcript: ENSDART00000124649.4 alg13-202

Description

ALG13 UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]

Gene Synonyms

otud4, otul, z-otu

Location

Chromosome 21: 34,233,492-34,261,677 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 21 domains and features, is associated with 583 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054374.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064320.8	alg13-201	2837	859aa	ENSDARP00000064319.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000124649.4	alg13-202	2820	889aa	ENSDARP00000112151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIU2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000172381.2	alg13-203	2711	854aa	ENSDARP00000136141.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPL2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,820 bps, Translation length: 889 residues

Version

ENSDART00000124649.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000124649.4 alg13-202

Summary

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Transcript: ENSDART00000124649.4 alg13-202

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