Transcript: ENSDART00000124189.4 CMAS-202

Description

cytidine monophosphate N-acetylneuraminic acid synthetase a [Source:ZFIN;Acc:ZDB-GENE-050420-277]

Location

Chromosome 4: 14,727,018-14,736,600 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 360 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057334.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158094.2	CMAS-203	1945	430aa	ENSDARP00000134059.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E671	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000124189.4	CMAS-202	1580	411aa	ENSDARP00000111288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131666.2	CMAS-201	1187	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,580 bps, Translation length: 411 residues

Version

ENSDART00000124189.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000124189.4 CMAS-202

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Transcript: ENSDART00000124189.4 CMAS-202

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