Transcript: ENSDART00000123950.4 prima1-201

Description

proline rich membrane anchor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-62]

Location

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 569 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123950.4	prima1-201	4145	159aa	ENSDARP00000108941.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FER7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149300.2	prima1-202	448	85aa	ENSDARP00000124151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,145 bps, Translation length: 159 residues

Version

ENSDART00000123950.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.