Transcript: ENSDART00000123815.3 JAM3-201

Description

junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]

Location

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 620 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123815.3	JAM3-201	2152	301aa	ENSDARP00000105600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183363.1	JAM3-202	6039	271aa	ENSDARP00000147562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184994.1	JAM3-203	5647	271aa	ENSDARP00000150214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188718.1	JAM3-204	819	272aa	ENSDARP00000149766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,152 bps, Translation length: 301 residues

Version

ENSDART00000123815.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.