Transcript: ENSDART00000123680.3 PRKCQ-201

Description

protein kinase C, theta [Source:ZFIN;Acc:ZDB-GENE-041210-195]

Location

About this transcript

This transcript has 17 exons, is annotated with 36 domains and features, is associated with 512 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046253.5	PRKCQ-202	2142	713aa	ENSDARP00000046252.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R506	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123680.3	PRKCQ-201	2128	709aa	ENSDARP00000108813.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000176982.2	PRKCQ-203	1173	290aa	ENSDARP00000144017.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,128 bps, Translation length: 709 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000123680.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.