Transcript: ENSDART00000123381.3 si:ch211-117k10.3-201

Description

si:ch211-117k10.3 [Source:ZFIN;Acc:ZDB-GENE-141212-273]

Location

About this transcript

This transcript has 3 exons, is annotated with 27 domains and features, is associated with 403 variant alleles and maps to 354 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123381.3	si:ch211-117k10.3-201	5340	371aa	ENSDARP00000112329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162305.2	si:ch211-117k10.3-202	1169	371aa	ENSDARP00000133050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEM3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 5,340 bps, Translation length: 371 residues

Version

ENSDART00000123381.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]