Transcript: ENSDART00000123198.4 HSPA12A-204

Description

heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]

Location

Chromosome 17: 21,220,951-21,280,185 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 7 domains and features, is associated with 1673 variant alleles and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070603.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123198.4	HSPA12A-204	2614	671aa	ENSDARP00000106960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181356.1	HSPA12A-206	2294	655aa	ENSDARP00000149134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RN86	-
ENSDART00000156580.3	HSPA12A-203	1826	493aa	ENSDARP00000129021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000157518.2	HSPA12A-205	1569	411aa	ENSDARP00000137065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000155221.3	HSPA12A-201	1024	249aa	ENSDARP00000127681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166524.2	HSPA12A-202	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,614 bps, Translation length: 671 residues

Version

ENSDART00000123198.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000123198.4 HSPA12A-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000123198.4 HSPA12A-204

Summary

About Us

Get help

Our sister sites

Follow us