Transcript: ENSDART00000123040.4 pfkpb-201

Description

phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]

Gene Synonyms

si:dkeyp-12a9.4

Location

Chromosome 2: 48,119,494-48,171,441 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 28 domains and features, is associated with 1839 variant alleles and maps to 257 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012801.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123040.4	pfkpb-201	4870	782aa	ENSDARP00000104718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000156258.4	pfkpb-205	2349	782aa	ENSDARP00000128326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDM7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000146553.2	pfkpb-204	1005	335aa	ENSDARP00000122866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQS5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000141152.2	pfkpb-203	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137733.2	pfkpb-202	391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,870 bps, Translation length: 782 residues

Version

ENSDART00000123040.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000123040.4 pfkpb-201

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Transcript: ENSDART00000123040.4 pfkpb-201

Summary

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