Transcript: ENSDART00000122945.4 NOC2L-201

Description

NOC2-like nucleolar associated transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-000607-75]

Location

Chromosome 23: 23,126,130-23,179,417 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 21 domains and features, is associated with 655 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000001754.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091662.6	NOC2L-203	2900	752aa	ENSDARP00000086095.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000122945.4	NOC2L-201	2876	744aa	ENSDARP00000105346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141853.2	NOC2L-202	823	187aa	ENSDARP00000113596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,876 bps, Translation length: 744 residues

Version

ENSDART00000122945.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000122945.4 NOC2L-201

Summary

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Transcript: ENSDART00000122945.4 NOC2L-201

Summary

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