Transcript: ENSDART00000122860.4 acvr1l-202

Description

activin A receptor, type 1 like [Source:ZFIN;Acc:ZDB-GENE-990415-9]

Location

Chromosome 2: 41,524,238-41,530,598 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 225 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014986.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017977.8	acvr1l-201	3499	506aa	ENSDARP00000003221.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O73736	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127520.3	acvr1l-203	1619	506aa	ENSDARP00000111550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O73736	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122860.4	acvr1l-202	457	106aa	ENSDARP00000108954.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140138.2	acvr1l-204	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 457 bps, Translation length: 106 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000122860.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000122860.4 acvr1l-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000122860.4 acvr1l-202

Summary

About Us

Get help

Our sister sites

Follow us