Transcript: ENSDART00000122793.3 mitfa-202

Description

melanocyte inducing transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]

Gene Synonyms

Mitf-related gene, Mitf2, nac, nacre, z3A.1

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 636 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056457.5	mitfa-201	1652	412aa	ENSDARP00000056456.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PWC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143374.4	mitfa-203	1794	349aa	ENSDARP00000114096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC93	-
ENSDART00000122793.3	mitfa-202	636	24aa	ENSDARP00000106194.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMU5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 636 bps, Translation length: 24 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000122793.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.