Transcript: ENSDART00000122737.3 prdm16-202

Description

PR domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-080613-2]

Location

About this transcript

This transcript has 10 exons, is annotated with 71 domains and features, is associated with 470 variant alleles and maps to 73 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000122737.3	prdm16-202	2783	927aa	ENSDARP00000107731.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000086053.6	prdm16-201	2727	908aa	ENSDARP00000080488.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186631.1	prdm16-203	645	214aa	ENSDARP00000154637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,783 bps, Translation length: 927 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000122737.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.