Transcript: ENSDART00000122687.3 opn4a-201

Description

opsin 4a (melanopsin) [Source:NCBI gene;Acc:571624]

Gene Synonyms

opn4, opn4m1

Location

About this transcript

This transcript has 11 exons, is annotated with 33 domains and features, is associated with 733 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122687.3	opn4a-201	1945	594aa	ENSDARP00000109133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,945 bps, Translation length: 594 residues

Version

ENSDART00000122687.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.