Transcript: ENSDART00000122617.4 lgals17-201

Description

galectin 17 [Source:ZFIN;Acc:ZDB-GENE-131121-418]

Gene Synonyms

lgals9, si:ch211-24o10.6

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 444 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122617.4	lgals17-201	1140	271aa	ENSDARP00000109456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155526.2	lgals17-202	608	134aa	ENSDARP00000129359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGK2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000155723.2	lgals17-203	851	36aa	ENSDARP00000128258.1	Nonsense mediated decay	X1WDF9	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,140 bps, Translation length: 271 residues

Version

ENSDART00000122617.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.