Transcript: ENSDART00000122352.4 P4HA2-201

Description

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 411 variant alleles and maps to 185 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174463.2	P4HA2-202	1938	536aa	ENSDARP00000143396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8C8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000024137.8	P4HA2-203	1938	514aa	ENSDARP00000027028.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG45	-
ENSDART00000160845.2	P4HA2-204	1583	514aa	ENSDARP00000135715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG45	-
ENSDART00000122352.4	P4HA2-201	1477	408aa	ENSDARP00000109880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,477 bps, Translation length: 408 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000122352.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.