Transcript: ENSDART00000122334.3 si:ch211-285c6.2-201

Description

si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]

Location

Chromosome 7: 3,444,473-3,454,482 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 28 domains and features and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079234.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122334.3	si:ch211-285c6.2-201	1761	586aa	ENSDARP00000105560.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000138247.4	si:ch211-285c6.2-202	1834	579aa	ENSDARP00000116814.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M6Z1L5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000144363.2	si:ch211-285c6.2-203	422	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,761 bps, Translation length: 586 residues

Version

ENSDART00000122334.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000122334.3 si:ch211-285c6.2-201

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Transcript: ENSDART00000122334.3 si:ch211-285c6.2-201

Summary

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