Transcript: ENSDART00000121981.3 SMARCE1-201

Description

SWI/SNF related BAF chromatin remodeling complex subunit E1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]

Location

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 197 variant alleles and maps to 201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121981.3	SMARCE1-201	2072	420aa	ENSDARP00000112446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803S1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000011319.8	SMARCE1-202	1995	406aa	ENSDARP00000024751.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190341.1	SMARCE1-203	1263	420aa	ENSDARP00000146341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803S1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,072 bps, Translation length: 420 residues

Version

ENSDART00000121981.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.