Transcript: ENSDART00000121473.3 dnajc7-201

Description

DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:NCBI gene (formerly Entrezgene);Acc:406579]

Location

Chromosome 3: 17,878,181-17,909,098 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 35 domains and features, is associated with 240 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058148.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166430.3	dnajc7-203	4650	522aa	ENSDARP00000131631.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000121473.3	dnajc7-201	3227	516aa	ENSDARP00000105412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180218.1	dnajc7-205	3049	472aa	ENSDARP00000156894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000163421.2	dnajc7-202	511	138aa	ENSDARP00000137246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167953.2	dnajc7-204	751	188aa	ENSDARP00000132151.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,227 bps, Translation length: 516 residues

Version

ENSDART00000121473.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000121473.3 dnajc7-201

Summary

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Transcript: ENSDART00000121473.3 dnajc7-201

Summary

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