Transcript: ENSDART00000115335.5 erich1-201

Description

glutamate rich 1 [Source:ZFIN;Acc:ZDB-GENE-240625-1]

Location

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 740 variant alleles and maps to 324 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153964.3	erich1-202	2207	312aa	ENSDARP00000129489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156953.2	erich1-205	893	187aa	ENSDARP00000129336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000115335.5	erich1-201	2701	312aa	ENSDARP00000101410.2	Nonsense mediated decay	E7FD79	-
ENSDART00000156696.3	erich1-204	921	187aa	ENSDARP00000129260.1	Nonsense mediated decay	-	-
ENSDART00000154108.2	erich1-203	777	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,701 bps, Translation length: 312 residues

Version

ENSDART00000115335.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.