Transcript: ENSDART00000115224.5 NECTIN1-202

Description

nectin cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-090224-1]

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 377 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000115224.5	NECTIN1-202	1796	475aa	ENSDARP00000102277.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101782.5	NECTIN1-201	783	219aa	ENSDARP00000092558.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,796 bps, Translation length: 475 residues

Version

ENSDART00000115224.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.