Transcript: ENSDART00000115089.4 zgc:171482-201

Description

zgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]

Location

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 120 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138981.3	zgc:171482-202	1224	134aa	ENSDARP00000117708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JST7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000115089.4	zgc:171482-201	2331	233aa	ENSDARP00000098098.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141645.2	zgc:171482-203	234	78aa	ENSDARP00000116257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,331 bps, Translation length: 233 residues

Version

ENSDART00000115089.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]