Transcript: ENSDART00000115071.4 selenop2-201

Description

Danio rerio selenoprotein P2 (selenop2), mRNA. [Source:RefSeq mRNA;Acc:NM_001353911]

Gene Synonyms

SePPb, SelPb, cb689, fb59b06, id:ibd5022, sePb, sepp1b, wu:fb59b06

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 278 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115071.4	selenop2-201	1315	360aa	ENSDARP00000100393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170495.2	selenop2-204	818	173aa	ENSDARP00000140653.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUA1	-
ENSDART00000124941.4	selenop2-202	903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145909.2	selenop2-203	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,315 bps, Translation length: 360 residues

Version

ENSDART00000115071.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.