Transcript: ENSDART00000115046.4 xcr1a.1-202

Description

chemokine (C motif) receptor 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-070302-6]

Gene Synonyms

XCR1aa, xcr1a

Location

About this transcript

This transcript has 2 exons, is annotated with 28 domains and features, is associated with 160 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077122.6	xcr1a.1-201	1008	335aa	ENSDARP00000071590.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000115046.4	xcr1a.1-202	1147	313aa	ENSDARP00000103498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA46	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,147 bps, Translation length: 313 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000115046.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.