Transcript: ENSDART00000114911.4 sdccag8-201

Description

SHH signaling and ciliogenesis regulator sdccag8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]

Location

Chromosome 13: 11,073,282-11,166,731 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 16 domains and features, is associated with 2154 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078947.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182462.1	sdccag8-206	2512	702aa	ENSDARP00000153600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QM06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114911.4	sdccag8-201	2672	623aa	ENSDARP00000099835.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137816.3	sdccag8-204	934	197aa	ENSDARP00000112629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148100.3	sdccag8-205	783	186aa	ENSDARP00000116009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134888.3	sdccag8-203	667	101aa	ENSDARP00000116315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131320.2	sdccag8-202	408	86aa	ENSDARP00000120617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 2,672 bps, Translation length: 623 residues

Version

ENSDART00000114911.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000114911.4 sdccag8-201

Summary

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Transcript: ENSDART00000114911.4 sdccag8-201

Summary

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