Transcript: ENSDART00000114886.3 SCG5-202

Description

secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]

Location

Chromosome 19: 47,524,022-47,527,192 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 57 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077045.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114886.3	SCG5-202	995	219aa	ENSDARP00000101682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186636.1	SCG5-204	1173	219aa	ENSDARP00000144917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171140.2	SCG5-203	980	219aa	ENSDARP00000134850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171379.2	SCG5-201	718	120aa	ENSDARP00000133009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 995 bps, Translation length: 219 residues

Version

ENSDART00000114886.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000114886.3 SCG5-202

Summary

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Transcript: ENSDART00000114886.3 SCG5-202

Summary

About Us

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