Transcript: ENSDART00000114746.4 LRRC58-201

Description

leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]

Location

About this transcript

This transcript has 4 exons, is annotated with 22 domains and features, is associated with 10 variant alleles and maps to 41 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114746.4	LRRC58-201	1245	351aa	ENSDARP00000098310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140846.2	LRRC58-202	860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,245 bps, Translation length: 351 residues

Version

ENSDART00000114746.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.