Transcript: ENSDART00000114536.4 si:ch211-198k9.6-201

Description

si:ch211-198k9.6 [Source:ZFIN;Acc:ZDB-GENE-090312-4]

Gene Synonyms

zgc:173948

Location

Chromosome 1: 29,178,117-29,179,930 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 60 variant alleles and maps to 1881 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069804.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114536.4	si:ch211-198k9.6-201	1036	173aa	ENSDARP00000098381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186905.1	si:ch211-198k9.6-204	522	173aa	ENSDARP00000148600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGR2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149219.3	si:ch211-198k9.6-202	1397	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150004.2	si:ch211-198k9.6-203	1174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,036 bps, Translation length: 173 residues

Version

ENSDART00000114536.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000114536.4 si:ch211-198k9.6-201

Summary

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Transcript: ENSDART00000114536.4 si:ch211-198k9.6-201

Summary

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