Transcript: ENSDART00000114302.2 pcdh2aa1-201

Description

protocadherin 2 alpha a 1 [Source:ZFIN;Acc:ZDB-GENE-041118-13]

Gene Synonyms

pcdh2a8, pcdh2aa1-vCP

Location

About this transcript

This transcript has 1 exon, is annotated with 53 domains and features, is associated with 56 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189869.1	pcdh2aa1-202	3183	935aa	ENSDARP00000157530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8S0H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114302.2	pcdh2aa1-201	2352	784aa	ENSDARP00000100882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE55	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,352 bps, Translation length: 784 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000114302.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.