Transcript: ENSDART00000114215.5 grhl3-201

Description

grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]

Gene Synonyms

cb467, sb:cb467, si:dkey-221l4.7, wu:fa01c12, wu:fb74c01

Location

About this transcript

This transcript has 15 exons, is annotated with 10 domains and features, is associated with 430 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114215.5	grhl3-201	2659	557aa	ENSDARP00000097661.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147192.2	grhl3-203	776	229aa	ENSDARP00000116930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144663.2	grhl3-202	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151911.2	grhl3-204	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,659 bps, Translation length: 557 residues

Version

ENSDART00000114215.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.