Transcript: ENSDART00000113909.5 PLBD1-201

Description

si:ch73-139e5.2 [Source:ZFIN;Acc:ZDB-GENE-130531-47]

Location

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 286 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113909.5	PLBD1-201	1542	514aa	ENSDARP00000098739.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000153927.3	PLBD1-202	1491	496aa	ENSDARP00000128717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WER6	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,542 bps, Translation length: 514 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000113909.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.