Transcript: ENSDART00000113644.4 VPS39-202

Description

VPS39 subunit of HOPS complex [Source:ZFIN;Acc:ZDB-GENE-080530-2]

Location

About this transcript

This transcript has 24 exons, is annotated with 8 domains and features, is associated with 1153 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000113644.4	VPS39-202	6807	875aa	ENSDARP00000100792.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156303.2	VPS39-201	2601	851aa	ENSDARP00000129254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,807 bps, Translation length: 875 residues

Version

ENSDART00000113644.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.