Transcript: ENSDART00000113642.4 zgc:163098-201

Description

zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]

Location

About this transcript

This transcript has 24 exons, is annotated with 49 domains and features, is associated with 796 variant alleles and maps to 210 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113642.4	zgc:163098-201	3117	874aa	ENSDARP00000101139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PN19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114671.4	zgc:163098-202	1104	367aa	ENSDARP00000097831.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000122919.3	zgc:163098-203	812	218aa	ENSDARP00000110081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 3,117 bps, Translation length: 874 residues

Version

ENSDART00000113642.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.