Transcript: ENSDART00000113550.4 si:dkey-16p21.7-201

Description

si:dkey-16p21.7 [Source:ZFIN;Acc:ZDB-GENE-131122-54]

Location

About this transcript

This transcript has 19 exons, is annotated with 27 domains and features, is associated with 597 variant alleles and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113550.4	si:dkey-16p21.7-201	4594	860aa	ENSDARP00000102022.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000168483.2	si:dkey-16p21.7-202	1368	455aa	ENSDARP00000139763.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IVA2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181472.1	si:dkey-16p21.7-203	1213	188aa	ENSDARP00000150066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9U5	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 4,594 bps, Translation length: 860 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000113550.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.