Transcript: ENSDART00000113524.4 fam20ca-201

Description

FAM20C golgi associated secretory pathway kinase a [Source:ZFIN;Acc:ZDB-GENE-130530-750]

Gene Synonyms

fam20c1, zmp:0000000747

Location

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 1446 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113524.4	fam20ca-201	1638	545aa	ENSDARP00000098755.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000158997.2	fam20ca-202	1608	535aa	ENSDARP00000140373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2L6H2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,638 bps, Translation length: 545 residues

Version

ENSDART00000113524.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.