Transcript: ENSDART00000113441.4 mylk5-201

Description

myosin, light chain kinase 5 [Source:ZFIN;Acc:ZDB-GENE-050309-74]

Location

About this transcript

This transcript has 17 exons, is annotated with 40 domains and features, is associated with 796 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113441.4	mylk5-201	3153	856aa	ENSDARP00000097960.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172456.2	mylk5-203	268	90aa	ENSDARP00000130258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000165087.2	mylk5-202	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,153 bps, Translation length: 856 residues

Version

ENSDART00000113441.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.