Transcript: ENSDART00000112924.5 fbxo5-202

Description

F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]

Location

About this transcript

This transcript has 5 exons, is associated with 410 variant alleles and maps to 59 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000056962.7	fbxo5-201	1716	384aa	ENSDARP00000056961.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187352.1	fbxo5-203	5160	384aa	ENSDARP00000144846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000112924.5	fbxo5-202	831	116aa	ENSDARP00000101772.4	Nonsense mediated decay	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 831 bps, Translation length: 116 residues

Version

ENSDART00000112924.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.