Transcript: ENSDART00000112900.4 PSD-203

Description

pleckstrin and Sec7 domain containing a [Source:ZFIN;Acc:ZDB-GENE-090313-44]

Location

Chromosome 13: 22,740,038-22,771,708 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 24 domains and features, is associated with 613 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078102.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189320.1	PSD-202	2191	537aa	ENSDARP00000149269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B3Q5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000112900.4	PSD-203	1818	527aa	ENSDARP00000098718.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PN09	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000140151.2	PSD-201	1514	504aa	ENSDARP00000123331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,818 bps, Translation length: 527 residues

Version

ENSDART00000112900.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000112900.4 PSD-203

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Transcript: ENSDART00000112900.4 PSD-203

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