Transcript: ENSDART00000112782.4 CSPG4-201

Description

chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 59 domains and features, is associated with 42 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112782.4	CSPG4-201	7072	2305aa	ENSDARP00000101583.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181740.1	CSPG4-202	6819	2272aa	ENSDARP00000144807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 7,072 bps, Translation length: 2,305 residues

Version

ENSDART00000112782.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.