Transcript: ENSDART00000112497.4 zgc:198329-201

Description

zgc:198329 [Source:ZFIN;Acc:ZDB-GENE-080226-6]

Gene Synonyms

sc:d0175, sc:d0817

Location

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 526 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112497.4	zgc:198329-201	2013	414aa	ENSDARP00000101845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4JYL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180445.1	zgc:198329-202	1245	414aa	ENSDARP00000151987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4JYL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,013 bps, Translation length: 414 residues

Version

ENSDART00000112497.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.